Metabolic Flux Analysis MCP Connector for Claude

This MCP server provides a suite of tools for performing Flux Balance Analysis (FBA) on metabolic networks. It allows users to calculate optimal intracellular flux distributions, determine growth yields, and identify the specific reactions that limit metabolic productivity. By using run_fba, you can find the optimal flux distribution for a given stoichiometric model and environmental constraints. You can then use identify_limiting_reactions to pinpoint bottlenecks and calculate_yield_efficiency to measure the conversion rate of substrates to target products. The validate_model_consistency tool ensures your stoichiometric model is mathematically sound before starting optimization.